Interface to the python dvid_tools module from Philipp Schlegel

dvid_tools provides a lower level and less specific interface to DVID that corresponding manc_* functions but does include some functionality that is not yet available.

install_dvid_tools installs the python dvid_tools module

Usage

dvid_tools(user = getOption("malevnc.dvid_user"), node = "neutu")

install_dvid_tools(pyinstall = "none")

Arguments

user

Default DVID user names

node

default DVID node to use for queries (see manc_dvid_node)

pyinstall

whether to install python as well as the dvidtools package. Default none will not install.

Details

The dvid_tools_module will be cached using memoise. You can modify the default user with the `$setup` method.

See also

https://github.com/flyconnectome/dvid_tools, https://github.com/flyconnectome/dvid_tools, https://emdata5.janelia.org/api/help/ for further details.

Examples

if (FALSE) { # \dontrun{
dt=dvid_tools()
dt
# nb must explicity use integers for bodyids
dt$get_annotation(bodyid = 10000L)

# get detailed help
reticulate::py_help(dt$get_adjacency)
} # }