Convenience wrapper for neuprint connection queries for VNC dataset

Convenience wrapper for neuprint connection queries for VNC dataset

Usage

manc_connection_table(
  ids,
  partners = c("inputs", "outputs"),
  prepost = c("PRE", "POST"),
  moredetails = "recommended",
  conn = manc_neuprint(),
  ...
)

Arguments

ids

A set of body ids in any form understandable to manc_ids

partners

Either inputs or outputs. Redundant with prepost, but probably clearer.

prepost

PRE: look for partners presynaptic (i.e upstream inputs) or POST: postsynaptic (downstream outputs) to the given bodyids. NB this is redundant to the partners argument and you should only use one.

moredetails

Whether to include additional metadata information such as hemilineage, side etc. Can take one of the values c('minimal', 'recommended', 'neuprint', 'all'). In addition TRUE is a synonym for 'neuprint' and F is a synonym for 'minimal'.

conn

Optional, a neuprint_connection object, which also specifies the neuPrint server. Defaults to manc_neuprint() to ensure that query is against the VNC dataset.

...

additional arguments passed to neuprint_connection_table

Value

see neuprint_connection_table

See also

Other manc-neuprint: manc_ids(), manc_neuprint()

Examples

# \donttest{
down=manc_connection_table("DNp01", partners='outputs')
#> Error in neuprint_login(server = server, dataset = dataset, token = token,     ...): Sorry you must specify a neuprint server! See ?neuprint_login for details!
if (FALSE) { # \dontrun{
manc_scene(down$partner[1:8], open=TRUE)
} # }
# }