Set DVID annotations for one or more ids. — manc_set_dvid

manc_set_dvid_instance sets DVID type and/or instance (name) information for one or more ids. It also adds user information for each field.

manc_set_dvid_annotations is a low level function to set arbitrary DVID annotations for exactly one body (expert use only!)

Usage

manc_set_dvid_instance(
  bodyid,
  instance = NULL,
  type = NULL,
  synonyms = NULL,
  user = getOption("malevnc.dvid_user"),
  node = "neutu",
  ...
)

manc_set_dvid_annotations(bodyid, annlist, node = "neutu")

Arguments

bodyid: One or more body ids (only one for manc_set_dvid_annotations)
instance: An instance, either a candidate type or an authoritative type with suffix to indicate side.
type: The authoritative type for a neuron
synonyms: An alternative type for a neuron (e.g. one used in the past literature, one which is useful but unlikely to be the authoritative type etc).
user: The DVID user. Defaults to options("malevnc.dvid_user").
node: The dvid node to use (defaults to 'neutu' i.e. current open node)
...: Additional arguments passed to pbapply::pbmapply when passing more than one bodyid.
annlist: An R list containing key value pairs. Key names are not checked.

Value

logical indicating success

Examples

if (FALSE) { # \dontrun{
manc_set_dvid_instance(1234567, type='LHAD1g1')
} # }
if (FALSE) { # \dontrun{
manc_set_dvid_annotations(1234567, list(instance='LHAD1g1', instance_user=''))

} # }