• Add JRC2018M template brain, from the Bogovic and Saalfeld average template brains.
  • Add JRCVNC2018U template nerve cord and surface, from the Bogovic and Saalfeld average template brains. Thanks to @istvantaisz (#45,#46)
  • Add JRCFIB2018F Janelia electron microscopy hemibrain template brain; this will help link EM connectomics and light level anatomical data (#43)
  • Add JRC2018U intersex template brain and surface, from the Bogovic and Saalfeld average template brains. This intersex template brain from may become the new registration standard. (#41)
  • Add JRCVNC2018F female template nerve cord and surface, from the Bogovic and Saalfeld average template brains. Thanks to @istvantaisz. (#42)
  • new github organisation: natverse/nat.flybrains
  • other standard doc features for https://natverse.github.io packages
  • fix DOI link for Dsim brain
  • description for JRC2018F brain
  • add citation
  • Add JRC2018F female template brain and surface, the first of the Bogovic and Saalfeld average template brains. The intersex template brain from this series may become the new registration standard.
  • Rename IVLP neuropil to WED in accordance with Ito et al 2014 (#37)
  • Doc tidying and fixes
  • add D. sechellia DsecI template and surface model (with Richard Benton)
  • add information and surfaces for Drosophila melanogaster, virilis and simulans template brains
  • add DOIs to template brain information
  • remove functions to support download/update of addition external registrations as these are now in nat.templatebrains v0.6
  • add function to download all Jefferis Lab registrations
  • added functions to support download/update of additional external registrations from github repositories (see ?add_reg_repo and ?update_reg_repos)
  • Add any additional registrations to options nat.templatebrains.regdirs on startup
  • add VNCIS1 template brain and surface model
  • package loading adds appropriate directories to the option nat.templatebrains.regdirs.
  • dev: add real tests for via registrations
  • dev: reinstate detailed transformation tests
  • add T1 mirroring registration
  • move tests to nat.templatebrains as well. We may yet want to streamline the tests in nat.templatebrains and move some of the more detailed ones back here.
  • depend on version 0.2 of nat.templatebrains
  • templatebrain definitions and functions moved to nat.templatebrains package
  • BrainTemplate class is now templatebrain
  • templatebrain function is now a dedicated constructor
  • as.templatebrain methods provided for im3d/character to make it easier to construct template brain objects from image files
  • doc: minor improvements