The DsecI reference brain is a shape averaged template brain generated using the CMTK avg_adm tool. See for the relevant code.

The surface model was constructed in Amira by G. Jefferis and R. Benton using a Z drop correction of the DsecI reference brain in Amira (e^u) followed by a simple threshold (10000), surface simplification to ~ 18,000 faces, default surface smoothing and manual editing in meshlab to remove a small unconnected island of points.

See also

Other Drosophilid-Brains: Dmel, Dsim, Dvir


if (FALSE) { # Depends on nat plot3d( plot3d(DsecI) }