This R list (which has additional class neuronlist) contains 20 skeletonised Drosophila Kenyon cells as dotprops objects. Original data is due to Chiang et al. 2011, who have generously shared their raw data at http://flycircuit.tw. Image registration and further processing was carried out by Greg Jefferis.

References

[1] Chiang A.S., Lin C.Y., Chuang C.C., Chang H.M., Hsieh C.H., Yeh C.W., Shih C.T., Wu J.J., Wang G.T., Chen Y.C., Wu C.C., Chen G.Y., Ching Y.T., Lee P.C., Lin C.Y., Lin H.H., Wu C.C., Hsu H.W., Huang Y.A., Chen J.Y., et al. (2011). Three-dimensional reconstruction of brain-wide wiring networks in Drosophila at single-cell resolution. Curr Biol 21 (1), 1--11.

See also

Examples

head(kcs20)
#> gene_name Name idid soma_side #> FruMARCM-M001205_seg002 FruMARCM-M001205_seg002 fru-M-500112 1024 L #> GadMARCM-F000122_seg001 GadMARCM-F000122_seg001 Gad1-F-900005 10616 L #> GadMARCM-F000050_seg001 GadMARCM-F000050_seg001 Gad1-F-100010 8399 R #> GadMARCM-F000142_seg002 GadMARCM-F000142_seg002 Gad1-F-300043 10647 L #> FruMARCM-F000270_seg001 FruMARCM-F000270_seg001 fru-F-400045 9758 L #> FruMARCM-F001115_seg002 FruMARCM-F001115_seg002 fru-F-300059 6182 R #> flipped Driver Gender X Y Z #> FruMARCM-M001205_seg002 FALSE fru-Gal4 M 361.4849 95.04480 84.10259 #> GadMARCM-F000122_seg001 FALSE Gad1-Gal4 F 367.8332 105.86755 94.73446 #> GadMARCM-F000050_seg001 TRUE Gad1-Gal4 F 382.8279 61.73213 97.28057 #> GadMARCM-F000142_seg002 FALSE Gad1-Gal4 F 349.5917 78.18986 96.69280 #> FruMARCM-F000270_seg001 FALSE fru-Gal4 F 387.5236 114.80344 87.84156 #> FruMARCM-F001115_seg002 TRUE fru-Gal4 F 352.0216 121.72034 100.52308 #> exemplar cluster idx type #> FruMARCM-M001205_seg002 FruMARCM-M001205_seg002 9 156 gamma #> GadMARCM-F000122_seg001 GadMARCM-F000122_seg001 70 1519 gamma #> GadMARCM-F000050_seg001 GadMARCM-F000050_seg001 57 1132 ab #> GadMARCM-F000142_seg002 GadMARCM-F000142_seg002 71 1535 apbp #> FruMARCM-F000270_seg001 FruMARCM-F000270_seg001 64 1331 ab #> FruMARCM-F001115_seg002 FruMARCM-F001115_seg002 44 795 ab
table(with(kcs20, type))
#> #> ab apbp gamma #> 10 3 7
#> glX #> 2
# see plot3d.neuronlist documentation for more details # \donttest{ plot3d(kcs20, col=type) # }