Return the entity ids for one or more model ids

catmaid_entities_from_models(skids, pid = 1, conn = NULL, ...)

Arguments

skids

One or more numeric skeleton ids or a character vector defining a query (see catmaid_skids or examples for the syntax).

pid

Project id (default 1)

conn

A catmaid_connection objection returned by catmaid_login. If NULL (the default) a new connection object will be generated using the values of the catmaid.* package options as described in the help for catmaid_login.

...

Additional arguments passed to the catmaid_fetch function

Value

An integer vector of entity ids each named by the corresponding model id (usually a skeleton id).

Details

This will normally be used to turn skeleton ids into neuron ids which are used e.g. for annotation purposes. This is probably not something that many end users will need but is required e.g. by catmaid_remove_annotations_for_skeletons.

See also