Map XYZ locations to bodyids for the male cns dataset — mcns_xyz2bodyid • malecns

Map XYZ locations to bodyids for the male cns dataset

Usage

mcns_xyz2bodyid(
  xyz,
  units = c("raw", "nm", "microns", "um"),
  node = "neutu",
  cache = FALSE
)

Arguments

xyz: xyz location (by default in raw malecns pixels)
units: The Optional units of the incoming 3D positions. Defaults to raw.
node: A DVID node as returned by manc_dvid_node. The default is to return the current active (unlocked) node being used through neutu.
cache: Whether to cache the result of this call for 5 minutes.

Value

A character vector of body ids (0 is missing somas / missing locations)

Examples

# \donttest{
# find the bodyids corresponding to set of soma positions
mcns_xyz2bodyid(mcns_somapos("/LAL04[12]", units='raw'), units='raw')
#> [1]  34187 512750
# }
# the APL
if (FALSE) { # \dontrun{
mcns_xyz2bodyid(cbind(24508, 15674, 26116)+4096)
} # }