Read point annotations from DVID using neuprint authentication
Source:R/annotations.R
manc_user_annotations.Rd
Read point annotations from DVID using neuprint authentication
Usage
manc_user_annotations(
email = "jefferis@gmail.com",
node = "clio",
raw = FALSE,
simplifyVector = TRUE,
neuprint_connection = NULL,
tz = "UTC"
)
Arguments
The google email address used to authenticate with neuprint
- node
The DVID node identifier
- raw
Whether to return the raw
httr::GET
response (defaultFALSE
) so that you can process it yourself rather than a pre-processed R list.- simplifyVector
Whether to simplify lists to vectors (and data frames where appropriate). Default
TRUE
, seejsonlite::fromJSON
for details.- neuprint_connection
A
neuprintr
connection object returned byneuprint_login
. This includes the required authorisation information to connect to DVID.- tz
Time zone for edit timestamps. Defaults to "UTC" i.e. Universal Time, Coordinated. Set to "" for your current timezone. See
as.POSIXct
for more details.
Examples
# \donttest{
df=manc_user_annotations()
#> Error in neuprint_login(server = server, dataset = dataset, token = token, ...): Sorry you must specify a neuprint server! See ?neuprint_login for details!
head(df)
#>
#> 1 function (x, df1, df2, ncp, log = FALSE)
#> 2 {
#> 3 if (missing(ncp))
#> 4 .Call(C_df, x, df1, df2, log)
#> 5 else .Call(C_dnf, x, df1, df2, ncp, log)
#> 6 }
json=httr::content(manc_user_annotations(raw=TRUE))
#> Error in neuprint_login(server = server, dataset = dataset, token = token, ...): Sorry you must specify a neuprint server! See ?neuprint_login for details!
# }